Sensitivity profile of blood culture isolates in a clinical analysis laboratory, Fortaleza, CE / Perfil de sensibilidade de isolados de hemocultura em um laboratório de análises clínicas, Fortaleza, CE / Perfil de sensibilidad de hemocultivos aislados en un laboratorio de análisis clínicos, Fortaleza, CE

Background and objectives: bacteremia is defined from the presence of bacteria in the bloodstream. Its clinical importance is associated with the high morbidity and mortality rate in the world. In severe cases, it can culminate in sepsis, with a constant increase in cases in Brazil. Therefore, this study aims to assess the main bacterial isolates in blood cultures and a possible change in their sensitivity profiles in a clinical analysis laboratory in Fortaleza, Ceará. Methods: an epidemiological, descriptive, retrospective study was carried out, with a quantitative approach of positive blood cultures, seeking to assess the main isolated microorganisms and their sensitivity profiles. The data used were obtained from the laboratory system through the EpiCenter→ software, from January 2019 to December 2020. Statistical analysis was performed using the Graphpad 7.0 software. Results: 840 microorganisms were identified from blood cultures, and the main ones were E. coli, K. pneumoniae, P. aeruginosa, S. epidermidis, S. aureus and S. haemolyticus. Some isolates show a change in the sensitivity profile, such as K. pneumoniae and P. aeruginosa, showing an increase in sensitivity to carbapenems and cephalosporins, while S. epidermidis showed a decrease in sensitivity to minocycline in the comparison between years 2019 and 2020.Conclusion: clinical isolates from blood cultures showed a change in the sensitivity profile between 2019 and 2020, taking into account that, for K. pneumoniae, P. aeruginosa, this change resulted in an increase in sensitivity, with an increase in resistance in S. epidermidis isolates.(AU)

Justificativa e objetivos: bacteremia é definida a partir da presença de bactérias na corrente sanguínea. Sua importância clínica está associada à alta taxa de morbidade e mortalidade no mundo. Nos casos graves, pode culminar em sepse, com constante aumento dos casos no Brasil. Portanto, o presente estudo tem como objetivo avaliar os principais isolados bacterianos em hemoculturas e uma possível alteração nos seus perfis de sensibilidade em um laboratório de análises clínicas de Fortaleza, Ceará. Métodos: foi realizado um estudo epidemiológico, descritivo, retrospectivo, com abordagem quantitativa de hemoculturas positivas, buscando avaliar os principais microrganismos isolados e seus perfis de sensibilidades. Os dados utilizados foram obtidos a partir do sistema laboratorial através do software EpiCenter→, referente ao período de janeiro de 2019 a dezembro de 2020. A análise estatística foi realizada pelo software Graphpad 7.0. Resultados: foram identificados 840 microrganismos a partir das hemoculturas, sendo os principais E. coli, K. pneumoniae, P. aeruginosa, S. epidermidis, S. aureus e S. haemolyticus. Alguns isolados apresentam uma alteração no perfil de sensibilidade, como K. pneumoniae e P. aeruginosa, apresentando um aumento na sensibilidade frente aos carbapenêmicos e as cefalosporinas, enquanto o S. epidermidis apresentou uma diminuição na sensibilidade frente à minociclina na comparação entre os anos de 2019 e 2020. Conclusão: os isolados clínicos de hemocultura apresentaram uma alteração no perfil de sensibilidade entre 2019 e 2020, levando em consideração que, para K. pneumoniae e P. aeruginosa, essa alteração resultou no aumento na sensibilidade, com aumento na resistência nos isolados de S. epidermidis.(AU)

Justificación y objetivos: la bacteriemia se define por la presencia de bacterias en el torrente sanguíneo. Su importancia clínica está asociada con la alta tasa de morbimortalidad en el mundo. En casos severos, puede culminar en sepsis, con un aumento constante de casos en Brasil. Por tanto, este estudio tiene como objetivo evaluar los principales aislados bacterianos en hemocultivos y un posible cambio en sus perfiles de sensibilidad en un laboratorio de análisis clínicos en Fortaleza, Ceará. Métodos: se realizó un estudio epidemiológico, descriptivo, retrospectivo, con abordaje cuantitativo de hemocultivos positivos, buscando evaluar los principales microorganismos aislados y sus perfiles de sensibilidad. Los datos utilizados se obtuvieron del sistema de laboratorio a través del software EpiCenter→, para el período de enero de 2019 a diciembre de 2020. El análisis estadístico se realizó mediante el software Graphpad 7.0. Resultados: se identificaron 840 microorganismos a partir de hemocultivos, siendo los principales E. coli, K. pneumoniae, P. aeruginosa, S. epidermidis, S. aureus y S. haemolyticus. Algunos aislados muestran un cambio en el perfil de sensibilidad, como K.pneumoniae y P. aeruginosa, mostrando un aumento en la sensibilidad a los carbapenémicos y cefalosporinas, mientras que S. epidermidis mostró una disminución en la sensibilidad a la minociclina, en la comparación entre los años de 2019 y 2020. Conclusiones: los aislados clínicos de hemocultivos mostraron un cambio en el perfil de sensibilidad entre 2019 y 2020, teniendo en cuenta que para K. pneumoniae, P. aeruginosa, este cambio resultó en un aumento de la sensibilidad, con un aumento de la resistencia en los aislados de S. epidermidis

Frecuencia de Streptococcus pneumoniae aislados de enfermedad invasiva en Paraguay, serotipos y perfil de sensibilidad (2010-2018) / Frequency of Streptococcus pneumoniae isolated from invasive disease in Paraguay, serotypes and sensitivity profile (2010-2018)

Streptococcus pneumoniae sigue siendo una de las causas más importantes de morbilidad y mortalidad en niños y adultos alrededor del mundo. El objetivo del estudio fue describir la frecuencia de aislamiento de S. pneumoniae en enfermedad invasiva, distribución de serotipos y sensibilidad antimicrobiana en Paraguay (2010-2018). Se estudiaron 793 cepas de S. pneumoniae aisladas de pacientes de todas las edades con enfermedad invasiva en Paraguay, provenientes de los diferentes centros centinelas y colaboradores en el marco de la vigilancia de meningitis y neumonías, durante el periodo 2010-2018. La frecuencia general según diagnóstico resultó 74.9% de neumonías (n=594), 18.4% de meningitis (n=146) y 6.7% de sepsis (n=53). El serotipo 14 fue más frecuente con 174 aislamientos (22.0%), seguido del serotipo 19A con 84 aislamientos (10.6%), el serotipo 3 con 66 aislamientos (8.3%) y el 6A con 37 aislamientos (4.7%). En meningitis se registró una frecuencia general de resistencia a penicilina del 32,2% y de ceftriaxona del 1,4%. En los casos de no meningitis la resistencia a penicilina fue del 0,8% y ceftriaxona del 0,3%. Los resultados de serotipos y sensibilidad antimicrobiana proporcionarán información necesaria para la implementación de estrategias de prevención y tratamiento de la enfermedad neumocócica en nuestro país, por lo que es necesaria una vigilancia continua para evaluar la carga de enfermedad, los serotipos circulantes y el aumento de la resistencia a los antibióticos

Streptococcus pneumoniae remains one of the most important causes of morbidity and mortality in children and adults worldwide. The objective of the study was to describe the frequency of isolation of S. pneumoniae in invasive disease, serotype distribution and antimicrobial susceptibility in Paraguay (2010-2018). We studied 793 strains of S. pneumoniae isolated from patients of all ages with invasive disease in Paraguay, from different sentinel centers and collaborators in the framework of meningitis and pneumonia surveillance during the period 2010-2018. The general frequency according to diagnosis was 74.9% of pneumonia (n = 594), 18.4% of meningitis (n = 146) and 6.7% of sepsis (n = 53). Serotype 14 was more frequent with 174 isolates (22.0%), followed by serotype 19A with 84 isolates (10.6%), serotype 3 with 66 isolates (8.3%) and 6A with 37 isolates (4.70%). In meningitis, there was a general frequency of penicillin resistance of 32.2% and ceftriaxone of 1.4%. In cases of non-meningitis, penicillin resistance was 0.8% and ceftriaxone 0.3%. The results of serotypes and antimicrobial sensitivity will provide necessary information for the implementation of prevention strategies and treatment of pneumococcal disease in our country, therefore it is necessary to continue monitoring in order to assess the burden of the disease, circulating serotypes and increased antibiotic resistance

Perfil de sensibilidad de Escherichia coli aislados de infecciones del tracto urinario de pacientes del Hospital Regional de Villarrica en el periodo de julio 2013 a agosto 2015 / Sensitivity profile of Escherichia coli isolated from urinary tract infections of patients of the Regional Hospital of Villarrica from July 2013 to August 2015

Introducción: El uso inapropiado de los antimicrobianos está conduciendo a la disminución de la sensibilidad antimicrobiana de microorganismos que producen enfermedades infecciosas. El uso clínico de los antimicrobianos ha sido paralelo al surgimiento de bacterias resistentes a su acción. Materiales y Métodos: Se realizó un estudio observacional, descriptivo, retrospectivo de corte transversal, con muestreo no probabilístico de casos consecutivos. La selección de antibióticos incluyó solo aquellos que tienen actividad frente a bacilos gram negativos y para la interpretación de los diámetros de los halos de inhibición se tomaron en cuenta los estándares de la Clinical and Laboratory Standards Institute (CLSI versión 2015). Resultados: La ampicilina presentó una resistencia del 100%, en cambio la ciprofloxacina presentó una sensibilidad del 73%, la amikacina del 100% y la gentamicina del 82%. La familia de los carbapenemicos presentó una sensibilidad del 100%. Dentro del grupo de los nitrofuranos se constató una sensibilidad del 96%. El trimetoprim/ sulfametoxazol, presentó una sensibilidad del 57%. Se determinó la presencia de Beta Lactamasa de Espectro Extendido (BLEE) en 13% de las cepas de Escherichia coli estudiadas. Conclusiones: La gentamicina, la nitrofurantoína y los carbapenemes presentaron una elevada sensibilidad, por lo que en presencia de cepas con BLEE serían opciones factibles acompañados siempre de la evaluación del perfil renal y clasificando la ITU como complicada o no.

Introduction: The inappropriate use of antimicrobials is leading to a decrease in the antimicrobial sensitivity of microorganisms that cause infectious diseases. The clinical use of antimicrobials has been parallel to the emergence of bacteria resistant to its action. Materials and methods: The sensitivity profile of Escherichia coli isolated from patients with urinary tract infections (UTI) concurrent to the Regional Hospital of Villarrica in the period from 2013 to 2015 was determined. Results: Ampicillin showed a resistance of 100%, ciprofloxacin showed a sensitivity of 73%. Amikacin showed a sensitivity of 100% and gentamicin 82%. The family of carbapenem showed a sensitivity of 100%. Within the group of nitrofurans a sensitivity of 96% was found. Trimethoprim / sulfamethoxazole had a sensitivity of 57%. The presence of Extended Spectrum Beta Lactamase (ESBL) was determined in 13% of the strains of Escherichia coli studied. Conclusions: Gentamicin, nitrofurantoin and carbapenem have a high sensitivity, so in the presence of strains with ESBL they would be feasible options always accompanied by the evaluation of the renal profile and classifying the UTI as complicated or not.

Dinâmica celular e microbiológica do leite de ovelhas Santa Inês acompanhadas durante a lactação / Cellular dynamics and microbiological of milk of Santa Inês ewes accompanied during lactation

Objetivou-se neste estudo, avaliar a dinâmica da infecção intramamária de ovelhas por meio da avaliação clínica, da contagem de células somáticas e do isolamento de bactérias envolvidas na infecção mamária ao longo de toda a lactação, bem como o perfil de sensibilidade destes isolados frente a antimicrobianos. Foram avaliadas 34 ovelhas da raça Santa Inês criadas em sistema semi-intensivo e submetidas ao mesmo manejo higiênico-sanitário e nutricional acompanhadas antes e durante o período de lactação: aproximadamente 10 dias que precedeu ao parto, 15 dias pós-parto (dpp), 30 dpp, 60 dpp e 90 dpp (secagem). Nestes momentos foi realizado o exame clínico da glândula. A contagem de células somáticas (CCS) e o CMT foram realizados nos momentos seguintes ao parto (15dpp, 30dpp, 60dpp e 90dpp), assim como a análise bacteriológica, realizada além dos momentos citados anteriormente, também no momento que precedeu ao parto. A colheita do leite foi realizada por ordenha manual. Todas as ovelhas foram submetidas à sorologia para lentivírus. Os dados da variável CCS foram submetidos ao teste de normalidade segundo Kolmogorov-Smirnov e por não atender a premissa de normalidade, foram transformados em log de base 10 (Log10). Por conseguinte efetuou-se a análise de variância e contraste de médias pelo teste de Tukey com nível de significância de P<0,05. Foi realizado o estudo descritivo das variáveis empregando-se a distribuição de frequências ( por cento). O valor médio da CCS das glândulas não reagentes ao CMT, ao longo do período de lactação, variou de 387.896,08 células/mL a 620.611,11 células/mL e nas glândulas reagentes, dependendo do escore do CMT, apresentou valores médios que variaram de 2.133.914,19 células/mL a 6.730.514,50 células/mL, sem contudo sofrer influência das diferentes fases da lactação. Os resultados obtidos permitiram concluir que a mastite subclínica representa uma preocupação sanitária na criação de ovelhas Santa Inês, chamando-se ...

The aim of this study was to evaluate the dynamics of intramammary infection in ewes by means of clinical examination, direct somatic cell count and the isolation of bacterial agents involved in the process during lactation, as well as the sensitivity profile of these isolates to different antimicrobials. Thirty four ewes from the Santa Inês breed, raised under semi-intensive conditions and submitted to identical sanitary and nutritional management were evaluated before and after parturition, about 10 days before parturition, 15 days after parturition (dap), 30 dap, 60 dap and 90 dap (weaning). In the respective phases a clinical exam of the mammary gland was accomplished. The direct somatic cell count (SCC) and the California Mastitis Test (CMT) were carried out in the phases postpartum (15 dap, 30 dap, 60 dap and 90 dap) as well as the bacteriological analysis which was also accomplished in the experimental phase that preceded parturition when the ewes were not milked. Milk sampling was achieved by manual means. All ewes were submitted to lentivirus serology test. The variable data of SCC were tested for normality according to Kolmogorov-Smirnov and not attended the premise of normality were transformed into log base 10 (Log10). Therefore was performed the analysis of variance and contrast of means by Tukey test with significance level of P<0.05. A descriptive study of the variables studied was done by frequency distribution ( percent). The average somatic cell count in negative reactions to the CMT varied 387.896,08 cells/mL to 620.611,11 cells/mL and glands reagents ranged up to 6.730.514,50 cells/mL, but there was no influence in the different stages of lactation. The results allowed to conclude that subclinical mastitis represents a sanitary concern in the breeding of Santa Ines ewes. The phase that precedes parturition is particularly worrying and deserves more attention since there is a higher bacterial isolation percentage in ...

A Projection-based Intensity Correction Method of Phased-Array Coil Images

PURPOSE: To develop a novel approach to calculate the sensitivity profiles of the phased array coil for use in non-uniform intensity correction. MATERIALS AND METHODS: The proposed intensity correction method estimates the sensitivity profile of the coil to extract intensity variations that represent the scanned image. The sensitivity profile is estimated by fitting a non-linear curve to various angles of projections through the imaged object in order to eliminate the high-frequency image content. Filtered back projection is then used to compute the estimates of the sensitivity profile of each coil. The method was applied both to phantom and brain images from 8-channel phased-array coil and 4-channel phased-array coil, respectively. RESULTS: Intensity-corrected images from the proposed method have more uniform intensity than those from the commonly used `sum-of-squares' approach. By using the proposed correction method, the intensity variation was reduced to 6.1% from 13.1%, acquired from the `sum-of-squares'. CONCLUSION: The proposed method is more effective at correcting the intensity non-uniformity of the phased-array surface-coil images than the conventional`sum-of-squares' method.

A Projection-based Intensity Correction Method of Phased-Array Coil Images

PURPOSE: To develop a novel approach to calculate the sensitivity profiles of the phased array coil for use in non-uniform intensity correction. MATERIALS AND METHODS: The proposed intensity correction method estimates the sensitivity profile of the coil to extract intensity variations that represent the scanned image. The sensitivity profile is estimated by fitting a non-linear curve to various angles of projections through the imaged object in order to eliminate the high-frequency image content. Filtered back projection is then used to compute the estimates of the sensitivity profile of each coil. The method was applied both to phantom and brain images from 8-channel phased-array coil and 4-channel phased-array coil, respectively. RESULTS: Intensity-corrected images from the proposed method have more uniform intensity than those from the commonly used `sum-of-squares' approach. By using the proposed correction method, the intensity variation was reduced to 6.1% from 13.1%, acquired from the `sum-of-squares'. CONCLUSION: The proposed method is more effective at correcting the intensity non-uniformity of the phased-array surface-coil images than the conventional`sum-of-squares' method.

The Effects of Gantry Rotation Time on Image Quality in 64-slice Spiral CT / 实用放射学杂志

Objective To study the effects of gantry rotation time on image quality in 64-slice spiral CT. Methods Using the same CT technique and body mode as those used for 64-slice spiral CT, delta phantom was firstly layed on the isocenter, then scanned and reconstructed with SOMATOM Sensation 64-slice spiral CT. Slice sensitivity profile(SSP) was measured from which modulation transfer function (MTF) were got by Fourier transfer. The Catphan500 phantom was layed on the table, then scanned and reconstructed with SOMATOM Sensation 64-slice spiral CT. The maximum linepair and minimum size of the targets visualized. Results The MTF curve was nearly overlapped on 0.5 s and 1.0 s gantry rotation time, the values of 5% MTF were 11.3 LP/cm and 11.9 LP/cm. Their spatial resolution and low contrast resolution were completely identical.Conclusion The image quality is no distinction on 0.5 s group and 1.0 s group of gantry rotation time. In order to shorten the scan time and eliminate the breath defect, we suggest that the 0.5 s gantry rotation time be used routinely at body spiral scan mode.